Omni-stainer user guide
  • ▶️Overview
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    • 🥳Quick Start: Omni-Stainer™ Bundles
    • 📦Omni-Stainer™ Box Contents
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    • 🥇Sample Mounting Instructions
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    • 🤖Automation (Opentrons OT-2) Setup
      • 📋Omni-Stainer Automation Overview
      • 📥Importing labware definitions
        • 🆕Opentrons App v7 Updated Labware Definitions
      • ⛱️StainWorks
      • 🗺️Labware Layouts
      • Thermal Sheath & Temperature-controlled incubations
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  • Background Knowledge, LLM semantic training data
    • 🗄️Background info and Lens training docs
      • Importing labware definitions
      • StainWorks software: a centralized app for accessing and configuring protocols
      • Reagent Layout files
      • Running the "Blue Dye Demo" protocol
      • Copy of CODEX (PhenoCyler™)
        • CODEX Reagent Setup
      • Temperature-controlled incubations
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        • Advanced Tissue Staining Solutions | ParheliaBio
        • Omni-Stainer™ S12 - Automation Bundle
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        • Opentrons Single-Channel Electronic Pipette p20 (GEN2)
        • Opentrons 300 µl Pipette Tip Tip Racks - 9600 tips
        • Greater Tissue Staining Workflow Efficiency. Slide Staining Kits
      • Opentrons setup guides
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        • GetstartedImportaprotocol
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      • Meet your Parhelia Omnistainer
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  1. Product Guides
  2. Automation (Opentrons OT-2) Setup
  3. Importing labware definitions

Opentrons App v7 Updated Labware Definitions

If running Opentrons app v7.0 or above, the "v7" version of the labware should be used to avoid automation errors.

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Last updated 1 year ago

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We have an important update regarding the recent Opentrons app v7 software. An issue with the latest update may cause labware definitions to behave unexpectedly.

We recommend updating your Labware definitions with those in the zip below:

Fresh protocols from Parhelia Stainworks will automatically load the new labware definitions, but to update previously run protocols, you will need to click "Reanalyze".

Make sure to calibrate the labware definition offset the first time you run a new labware or use it in a deck position for the first time.

Labware Offset Calibration

The updated labware do not require the manual 2 mm up offset like the prior labware.

Calibrate to the calibration points as described on the Opentrons App

🤖
📥
🆕
(or grab the "v7" files from our GitHub page)
How to replace an existing labware definition
How to reanalyze previously run protocols to update labware def
Labware Offset Calibration Walk Tutorial
5KB
v7_labware_defs_parhelia_omnistainer.zip
archive
Updated labware for Opentrons App v7 and above
Calibration point for S12 with thermal sheath on thermal module is the top of the NorthWest screw