> For the complete documentation index, see [llms.txt](https://docs.parheliabio.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://docs.parheliabio.com/background-knowledge-llm-semantic-training-data/background-info-and-lens-training-docs/more-parheliabio.com-content/parhelia-biosciences-faqs/page-1/frequently-asked-questions-parheliabio-website.md).

# Frequently asked questions parheliabio website

**Frequently asked questions**

**Frequently asked questions**

How does Omni-Stainer™ work?

**How does Omni-Stainer™ work?**

Omni-Stainer™ enables microscopy staining automation by hosting samples in thin capillary exchange chambers, thus allowing a liquid handler to supply reagents to the tops of the chambers. When a new buffer is added to the top, it is drawn into the chamber by the capillary force, instantly displacing the old buffer.

**What sample types does the Omni-Stainer™ support?**

Omni-Stainer™ exists in two versions: Omni-Stainer™ S12 for slide-mounted samples and Omni-Stainer™ C12 for coverslip-mounted samples. Please make sure to order the version according to your needs.

**What coverslip types does Omni-Stainer™ support?**

The coverslip instrument Omni-Stainer™ can accommodate samples mounted standard rectangular microscopy coverslips, 22x22 or 18x18 size.

**What types of applications require coverslip staining?**

Coverslip staining is less conventional than staining on slides but it is widely used in a number of applications, such as:

1. Cell cultures - adherent cell lines are often grown on coverslips as they easily adhere to the glass and form micro-colonies
2. TIRF - Total Internal Reflection Microscopy illuminates a thin surface layer of approx. \~200nm and therefore requires the sample to be adhered directly to the coverslip
3. Cyclic protocols that require on-microscope sample perfusion protocols, such as CODEX, CycIF, MERFISH, variations of STORM such as Exchange-PAINT - all require coverslip-mounted samples.

**What types of applications require slide-mounted samples?**

Most OCT fresh-frozen or FFPE tissue sample staining protocols are performed on slides. Those include Immunohistochemistry (IHC), Immunofluorescence (IF), In Situ Hybridization (ISH), Imaging Mass Cytometry (IMC).

**Does Omni-Stainer™ support heating and cooling?**

The Omni-Stainer™ is made of heat-conductive aluminum and can be used in conjuncture with a temperature control module (like the one here), allowing the temperature to be programmatically controlled between 4C and 95C. This enables a variety of protocols, such as FFPE Antigen Retrieval, smRNA-FISH, or CycIF to be performed directly inside the Omni-Stainer™ device.

**Does Omni-Stainer™ support heating and cooling?**

The Omni-Stainer™ is made of heat-conductive aluminum and can be used in conjuncture with a temperature control module (like the one here), allowing the temperature to be programmatically controlled between 4C and 95C. This enables a variety of protocols, such as FFPE Antigen Retrieval, smRNA-FISH, or CycIF to be performed directly inside the Omni-Stainer™ device.

smRNA-FISH

**Which liquid handlers are compatible with the Omni-Stainer™ device?**

Omni-Stainer™ can be used in most liquid handling robots that support 96-well-plate-sized labware, including Hamilton, Agilent Bravo, Tecan Evo, and others. For those labs that would need to purchase a liquid handler to enable Parhelia automation, we recommend Opentrons OT-2, a simple budget liquid handler that is available [here](https://parheliabio.com/product-category/opentrons-robot-purchase/)

![Automated Staining System](/files/W8Q5PCQaq3TaI3XV1jtr)

Omni-Stainer™ inside a liquid handling robot

**How does Omni-Stainer™ compare to other autostaining solutions?**

There are many staining automation solutions on the market, with big names from prominent vendors. However, most of those systems are bulky, expensive, not particularly reagent-efficient, and are oriented toward clinical pathology labs. Since they are not designed to be used in a research setting, such systems can be difficult to program and adapt to custom protocols. In contrast, Omni-Stainer™ is compact, affordable, extremely flexible and easy to use. In addition, the Omni-Stainer™ has the unique capability to stain coverslip-mounted samples.

![Parhelia Omni-Stainer](/files/8O2nb3zoi9koN1obTrKD)

Omni-Stainer™ hosts 12 coverslips samples and 12 slide samples.

**What kind of buffers does Omni-Stainer™ support?**

Omni-Stainer™ is made of chemically inert materials and is compatible with most aqueous buffers including those containing high-viscosity agents (e.g. dextran sulfate, glycerol), high salt buffers (up to 0.65M salt), detergents, DMF/DMSO, semi-polar organic solvents (methanol, ethanol, isopropanol, acetone). It is not compatible with non-polar solvents such as petrol distillates or xylenes.

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Dextran sulfate
